The way Bob is portraying Clark's injuries, he may never get back the major portion of his memory. It might be that Clark will (with Lois' help) realize that he is/was Superman, and that together they can rebuild both Clark's life and Superman's life - but this time they can do it together. At least now she can't accuse him of lying to her for two years. Surely she'll realize that Superman was going to fess up after returning from the Nightfall mission.
And then they can capture Luthor together, using Clark's special abilities. And wouldn't that be a twist? Luthor tried to kill Superman but was only orchestrating his own downfall.
Next chapter soon, I hope?
