I think that something that throws people off is that in one of the last scenes, Lois says something like, "I'm sorry my father couldn't find anything wrong with Dr. Klein's data."
Now, his memory was wiped before he could tell them anything, so one has to wonder how she knew that. After all, earlier, Sam had said that the figures weren't right.
I tend to take the approach that Dr. Klein was somehow wrong.
After all, he's a scientist, not a fertility expert. It's entirely possible that his results could be flawed, deliberately sabotaged, etc.
Laura (who loves writing next gen just so she can play with a different dynamic)